Right side hip pelvic back area pain.

On April suffered from burning urination and discomfort dr prescribed antibiotics for 7 days than after 7 days got discomfort&pain around right side pelvic and hip and till ribs pain was so severe went to urologist usg showed renal concreations on both kidney and bulky cervix took stone treatment for 20 days and drink lot of water but pain was not getting better did ct scan contrast and report was normal no stone only bulky cervix and few subcentimeter mesentric lymph nodes , urine culture showed ecoli and antibiotics resistance took antibiotics again urine culture negative with 2- 5 pus cell but my pain is not getting better now its not daily and it has reduce but it is still there and suddenly comes and goes and during period it becomes more severe consulted gyaenecologist she said its kidney pain not genital so I am totally considering after this my both hand joints also started paining my esr , crp was high ,creatinine was also 1.30 a bit high dr told, raise esionophil plz suggest