Urethral itch and discharge. Normal?

In the past 4 weeks I had some itches (especially when rubbed) at the inside of my urethral pipe along my penis, plus slight discomfort when urinating at certain times. Swab test done showed Escherichia coli growth with sentivity for levofloxacin amongst other antibiotics. At the beginning of the medication course with ciprofloxacin and doxycycline it felt like the itches had subsided. However on the 8 day of the 10 days course I notice I had begun to discharge pus from my penis. This was little at first but began to worsen as the days went by. A second test this time from a swab of the discharge 4 to 5 days after the end of the antibiotics course have been confirmed to show a fungi growth and no presence of bacteria. I am currently on the 3rd day of 5 for treatment with fluconazole 200mg and Ornilox tablets but it appears the pus is just getting worse as I seem to now have the discharge through the whole day which instead of just at mornings at the beginning. Is this normal?